The Marlins took a three-hitter into the ninth and were two outs from a 3-0 victory when pinch hitter Matt Stairs singled home the Phillies' first run. Lindstrom walked in a run before Victorino hit his second homer of the year on a 2-1 pitch.
Five pitches later, Chase Utley hit his fifth homer.
The rally cost Florida's Josh Johnson a victory. He allowed three hits in seven innings, struck out eight and lowered his ERA to 2.20.
The Marlins still own the best record in the NL at 11-5, but they have lost four games in a row and fell to 8-1 when they score first.
Dan Uggla hit a three-run homer with two out in the first off Brett Myers for Florida's only runs. The Phillies have given up at least one homer in all 15 games, extending a major league record to start the season.
Clay Condrey (3-0) pitches two hitless innings, and Ryan Madson struck out the side in the ninth.
The game drew 29,032 spectators, including 1,540 dogs on Bark in the Park Night, and it was a ruff one for Lindstrom. The Phillies had totaled five hits and one run over a 17-inning stretch when they snapped the slump against him in the ninth.
Jayson Werth doubled with one out, and after a walk, Stairs singled. Lou Marson walked to load the bases, and after a strikeout, Jimmy Rollins walked to force in a run.
Victorino then pulled a pitch into the right field stands, and Lindstrom (1-1) was showered with boos. He gave up four hits and three runs in two-thirds of an inning, blowing a save for the second time in five chances, and his ERA rose from 1.50 to 9.45.
Uggla hit his third homer with two out in the first to end an 0-for-21 slump, the longest hitless streak of his career. The hit followed singles by John Baker and Ross Gload.
