Some scientists say the contracts constrain academic freedom. A few signed the agreements, then changed their minds.
And others argue BP's contract is standard, and with little federal funding available to study the spill's impact, Gulf Coast researchers have few other options.
"I personally wouldn't care to have my research limited, but if I wanted to do work on the spill and this was the only way I could get out there and get working on it, I don't think there's a lot of alternatives," said Chris D'Elia, dean of the Louisiana State University School of the Coast and Environment.
BP confirms hiring more than a dozen scientists who have Gulf Coast expertise to assist with hundreds of lawsuits and assess the environmental damage caused by the spill.
"What we have asked is that they treat information from BP's lawyers as confidential, as is customary," said David Nicholas, a BP spokesman in London. "But we do not take the position that environmental data is confidential and we do not place restrictions on academics speaking about scientific data."
Still, American Association of University Professors President Cary Nelson said the three-year limitation could suppress information key to restoring the environment.
"Many scientists are turning down these contracts because they feel this research needs to be shared with the public, it needs to be shared with the government," said Nelson, whose group represents about 48,000 academics.
Researchers are asked to sign similar contracts with the National Oceanic and Atmospheric Administration, the federal agency charged with tracking the oil and assessing the damage.
Also in the mix is a hesitance to be associated with the company that's responsible for around 184 million gallons of oil spilling into the Gulf of Mexico.